IRE1-bZIP60 Pathway Is Required for Nicotiana attenuata Resistance to Fungal Pathogen Alternaria alternata

As an endoplasmic reticulum (ER) stress sensor, inositol-requiring enzyme 1 (IRE1) splices the bZIP60 mRNA, and produces an active bZIP60 transcription factor that regulates genes involved in the unfolded protein response (UPR) during ER stresses. This IRE1-bZIP60 pathway is conserved in plant species and recently implicated in plant-pathogen interaction. However, it is unclear whether this IRE1-bZIP60 pathway is involved in Nicotiana attenuata resistance to necrotic fungal pathogen, Alternaria alternata. In this study, transcriptional levels of chaperone protein genes, including luminal binding protein (BiP), protein disulfide isomerase (PDI), calnexin 1-like (CNX 1-like), and calreticulin (CRT), and genes involved in IRE1-bZIP60 pathway, were all significantly induced in N. attenuata leaves after A. alternata inoculation. Silencing IRE1 or bZIP60 led to N. attenuata plants more susceptible to A. alternata, which were associated with reduced gene expressions of Feruloyl-CoA 6′-hydroxylase 1 (F6′H1), a gene encoding a key enzyme for phytoalexin scopoletin and scopolin biosynthesis. Further, electromobility shift assays (EMSA) indicated that bZIP60 protein of spliced form could directly bind to the promoter region of F6′H1 in vitro. JA signaling pathway is required for N. attenuata resistance to A. alternata. Interestingly, the fungus-elicited transcriptional levels of BiP, PDI, CNX 1-like, CRT, IRE1, and bZIP60(s) were all significantly decreased in JA-deficient or JA-insensitive plants. Meanwhile, those genes were significantly induced by methyl jasmonate (MeJA) when applied exogenously. However, the transcriptional levels of JA-regulated genes allene oxide synthase (AOS) and lipoxygenease 3 (LOX3) were not affected in plants impaired with IRE1-bZIP60 pathway. Thus, it is concluded that IRE1-bZIP60 pathway is required for N. attenuata resistance to A. alternata, and JA signaling pathway plays an important role in the elicitation of chaperone protein genes and IRE1-bZIP60 pathway

Signaling pathways in hair aging

Hair follicle (HF) homeostasis is regulated by various signaling pathways. Disruption of such homeostasis leads to HF disorders, such as alopecia, pigment loss, and hair aging, which is causing severe health problems and aesthetic concerns. Among these disorders, hair aging is characterized by hair graying, hair loss, hair follicle miniaturization (HFM), and structural changes to the hair shaft. Hair aging occurs under physiological conditions, while premature hair aging is often associated with certain pathological conditions. Numerous investigations have been made to determine the mechanisms and explore treatments to prevent hair aging. The most well-known hypotheses about hair aging include oxidative stress, hormonal disorders, inflammation, as well as DNA damage and repair defects. Ultimately, these factors pose threats to HF cells, especially stem cells such as hair follicle stem cells, melanocyte stem cells, and mesenchymal stem cells, which hamper hair regeneration and pigmentation. Here, we summarize previous studies investigating the above mechanisms and the existing therapeutic methods for hair aging. We also provide insights into hair aging research and discuss the limitations and outlook

Construction of an integrated genetic linkage map for the A genome of Brassica napus using SSR markers derived from sequenced BACs in B. rapa

Background The Multinational Brassica rapa Genome Sequencing Project (BrGSP) has developed valuable genomic resources, including BAC libraries, BAC-end sequences, genetic and physical maps, and seed BAC sequences for Brassica rapa. An integrated linkage map between the amphidiploid B. napus and diploid B. rapa will facilitate the rapid transfer of these valuable resources from B. rapa to B. napus (Oilseed rape, Canola). Results In this study, we identified over 23,000 simple sequence repeats (SSRs) from 536 sequenced BACs. 890 SSR markers (designated as BrGMS) were developed and used for the construction of an integrated linkage map for the A genome in B. rapa and B. napus. Two hundred and nineteen BrGMS markers were integrated to an existing B. napus linkage map (BnaNZDH). Among these mapped BrGMS markers, 168 were only distributed on the A genome linkage groups (LGs), 18 distrubuted both on the A and C genome LGs, and 33 only distributed on the C genome LGs. Most of the A genome LGs in B. napus were collinear with the homoeologous LGs in B. rapa, although minor inversions or rearrangements occurred on A2 and A9. The mapping of these BAC-specific SSR markers enabled assignment of 161 sequenced B. rapa BACs, as well as the associated BAC contigs to the A genome LGs of B. napus. Conclusion The genetic mapping of SSR markers derived from sequenced BACs in B. rapa enabled direct links to be established between the B. napus linkage map and a B. rapa physical map, and thus the assignment of B. rapa BACs and the associated BAC contigs to the B. napus linkage map. This integrated genetic linkage map will facilitate exploitation of the B. rapa annotated genomic resources for gene tagging and map-based cloning in B. napus, and for comparative analysis of the A genome within Brassica species

Scattering of pulsed plane wave from a symmetrical groove doublet configuration

We have provided theoretical study on the spectral and temporal properties of the scattering of pulsed plane wave from a symmetrical groove doublet configuration. Based on the numerical calculation results, we show that the spectrum and the waveform of the scattered field are sensitive to the shape of the rectangular grooves when the grooves are deep enough. In both spectral and temporal domain, a damped oscillatory behavior occurs when the groove spacing increases. Furthermore, the spectral and temporal dependences of the angular distribution are consisted of interference-like fringe patterns. These patterns are sensitive to the size of the groove width and spacing rather than the groove shape when the depth is small enough. Our study takes the analysis of pulse scattering by finite grooves a step further on the theoretical side, and offers opportunities for the control of spectral and temporal properties of pulsed scattered wave in low frequency regime such as THz and microwave domain

Coupling interaction of electromagnetic wave in a groove doublet configuration

Based on the waveguide mode (WGM) method, coupling interaction of electromagnetic wave in a groove doublet configuration is studied. The formulation obtained by WGM method for a single groove [Prog. Electromagn. Res. 18, 1–17 (1998)] is extended to two grooves. By exploring the total scattered field of the configuration, coupling interaction ratios are defined to describe the interaction between grooves quantitatively. Since each groove in this groove doublet configuration is regarded as the basic unit, the effects of coupling interaction on the scattered fields of each groove can be investigated respectively. Numerical results show that an oscillatory behavior of coupling interaction is damped with increasing groove spacing. The incident and scattering angle dependence of coupling interaction is symmetrical when the two grooves are the same. For the case of two subwavelength grooves, the coupling interaction is not sensitive to the incident angle and scattering angle. Although the case of two grooves is discussed for simplicity, the formulation developed in this article can be generalized to arbitrary number of grooves. Moreover, our study offers a simple alternative to investigate and design metallic gratings, compact directional antennas, couplers, and other devices especially in low frequency regime such as THz and microwave domain

A method to design transmission resonances through subwavelength apertures based on designed surface plasmons

A plasmonic metamaterial is proposed for which an array of subwavelength apertures is pierced into a metallic foil whose one flat surface has been made with periodic rectangle holes of finite depth. Designed surface plasmons sustained by the holes are explored when the size and spacing of the holes are much smaller than those of the apertures. The transmission property of electromagnetic waves through the metamaterials is analyzed. Results show that the designed surface plasmons characterized by the holes could support the transmission resonances of the incident wave passing through the subwavelength apertures, and that the peak transmission wavelengths could be designed by controlling the geometrical and optical parameters of the holes. Example is taken at THz regime. Our work proposes a method to design the peak wavelengths, and may affect further engineering of surface plasmon optics, especially in THz to microwave regimes